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Home psycho About Contact Information Affiliations UC Davis Genome Center psycho UC Davis Dept. of Evolution & Ecology UC Davis Center for Population Biology UC Davis Dept. of Medical Microbiology & Immunology DOE Joint Genome Institute UC Davis Population Biology Graduate Group UC Davis Microbiology psycho Graduate Group UC Davis Computer Science Graduate Group UC Davis Ecology Graduate Group UC Davis Integrated Genetics and Genomics Graduate Group Chair of the PLoS Biology Advisory Board Assistant Director, UC Davis Microbiome psycho Core Facility CoPI UC Davis Innovating Communication in Scholarship (ICIS) Project Funding About Jonathan psycho Eisen Jonathan Eisen Bio Jonathan Eisen Full CV Eisen’s Google Profile/Plus Eisen’s Tree of Life Blog Eisen on Linked In Eisen’s Mendeley Page Contact psycho information Questions for Jonathan Eisen (Advice, Background, Projects, etc) Disclosures People Past Personnel Projects Major research topics Major Current Projects The Environmental Niche Atlas microBEnet Seagrass Microbiomes Metagenomic Phylogenetics ICIS – Innovating Communication in Scholarship Corn Microbiome Rice Microbiome psycho Genomic Encyclopedia of Bacteria and Archaea (GEBA) Other Current Research psycho DOG Mouth Microbiome Halophilic Archaea Phylogenomics Earth Microbiome Project The Eisenome Project Past Major Projects Chemosynthetic symbioses Mt. Erebus microbial biogeography Helicobacter associated microbes Drosophila microbiome psycho PLoS Hub in Biodiversity iSEEM (Moore Foundation) Bacterial Phylogenomics aTOL (NSF) DARPA Fundamental Laws of Biology (FUNBIO) Genome: Glassy-winged sharpshooter psycho symbionts Genome: psycho Tetrahymena (NSF & NIH) Genome: Wolbachia (NIH) Genome: Haloferax volcanii Metagenome: Sargasso Sea & Global Ocean Survey Genome: Nautilia symbionts Genome: Arabidopsis Genome: Plasmodium falciparum TIGR DOE Microbial Genomes TIGR Microbial Pathogen genomes Marine Plasmid Project Publications Full List of Eisen Publications Eisen’s Pubs on Mendeley Eisen Pubs on Google Scholar Eisen Lab Publications on Mendeley Evolution Textbook Eisen Pubs on Pubmed Lab Blog Lab Meeting Lab Publication Posts Undergraduate Aquarium Project Undergrad Genome Project Metagenomics Discussion psycho Group Seminar Postings UC Davis Courses News and Outreach The Eisen Lab in the News Gut Check: The Microbiome Game Eisen’s Tree of Life Blog microBEnet Blog Meetings organized by Members of the Eisen Lab Space Microbes Eisen Lab Blog Eisen’s Twitter Eisen Lab on Twitter Teaching and Outreach Notes Bodega Applied Phylogenetics Course Talks and Interviews Full List of Talks and Presentations “What is Open Access Publishing?” talk PhD Comics Animation psycho on “Open Access” w/ J. Eisen Jonathan Eisen’s TED Talk on “Meet Your Microbes” Some details on my TedMed talk Jonathan Eisen Talks on Youtube Eisen talks on Slideshare Compass Summit Talk on Dark Matter of Biology Eisen Interview on Mendelspod Retroblogging Meetings and Seminars: Posting Scans of Notes Products Software A5 Assembly Pipeline AMPHORA APIS Biotorrents ComboDB CompostBin Mauve Assembly Metrics PhyloSift phylOTU Pique STAP OTU Hunter WATERS Zorro Data Lab Sequence Data Eisen Lab Data at Figshare Sifting Families: SFams Darwin’s Finch Genome Data at Figshare Darwin’s Finch Genome Sequencing Notes Data from Morgan et al. metagenomic simulation Haloarchaea Data from Lynch et al. 2012 Data from Wu et al. 2011 Stalking 4th Domain paper Protocols 16S PCR Protocol Sequencing Costs Gut Check: The Microbiome Game ImpactStory-Eisen-on-Slideshare Jonathan Eisen’s Figshare ImpactStory-Eisen on Figshare ImpactStory-Eisen-on-Scholar Publications on Impact Story Miscellaneous psycho Humor World Anti Brain Doping psycho Authority April 1, 2008 Secret of the Ocean-Venter April 1, 2008 Collins responds psycho to Venter April 1, 2008 Thymineless Death Society tribute psycho to Phil Hanawalt Papers I have served as editor for Some notes on Big Data Old Web Site via Dropbox Eisen Old TIGR Web Site Eisen Twitter archive Miscellaneous Notes and Scans Retroblogging Meetings and Seminars: Posting Scans of Notes
Session 1: Navigating NCBI Molecular Data Through the Integrated Entrez System. 9 am – psycho 11:30 am, 9/15 Session 2: NCBI Genomes, Assemblies and Annotation Products: Microbes psycho to Human. 1 pm – 3:30 pm, 9/15 Session 3: Advanced NCBI BLAST. 9 am – 11:30 am, 9/16 Session 4: Gene Expression Resources at NCBI. 1 pm – 3:30 pm, 9/16
About Jonathan Eisen I am an evolutionary biologist and a Professor at U. C. Davis. (see my lab site here). My research focuses on the origin of novelty (how new processes and functions psycho originate). To study this I focus on sequencing and analyzing genomes of organisms, especially microbes and using phylogenomic analysis
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Lab Blog #UCDavis New Biology Postdoctoral Fellowship The Tree of Life #YAMMM Alert: Drug Discovery and Therapy World Congress, a meeting made for @rea